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torsdag 22 november 2018

TTR (18q12.1) Transtyretiinistä (stabilaattori tafamidis)

PubMed Search " TTR GENE"
https://www.ncbi.nlm.nih.gov/gene/7276
Also known as
CTS (carpal tunnel syndrome);
 ATTR; (transthyretin derived amyloid)
 CTS1;
 PALB; prealbumin
TBPA;Thyrocin binding prealbumin
 HEL111; human epididymis luminal protein
111HsT2651
Summary
This gene encodes one of the three prealbumins, which include alpha-1-antitrypsin, transthyretin and orosomucoid. The encoded protein, transthyretin, is a homo-tetrameric carrier protein, which transports thyroid hormones in the plasma and cerebrospinal fluid. It is also involved in the transport of retinol (vitamin A) in the plasma by associating with retinol-binding protein. The protein may also be involved in other intracellular processes including proteolysis, nerve regeneration, autophagy and glucose homeostasis.
 Mutations in this gene are associated with amyloid deposition, predominantly affecting peripheral nerves or the heart, while a small percentage of the gene mutations are non-amyloidogenic. 
The mutations are implicated in the etiology of several diseases, including amyloidotic polyneuropathy, euthyroid hyperthyroxinaemia, amyloidotic vitreous opacities, cardiomyopathy, oculoleptomeningeal amyloidosis, meningocerebrovascular amyloidosis and carpal tunnel syndrome (CTS) . [provided by RefSeq, Aug 2017]
Expression
Restricted expression toward liver (RPKM 2070.5) See more
Orthologs mouse all
Preferred Names
transthyretin
Names
epididymis luminal protein 111
prealbumin, amyloidosis type I
thyroxine-binding prealbumin
 
Conserved Domains (1) summary
smart00095
Location:27147
TR_THY; Transthyretin

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  Transthyretin Structure
Peptide sequence  Precursor https://www.ncbi.nlm.nih.gov/protein/NP_000362.1

##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="18"
                     /map="18q12.1"
     Protein         1..147
                     /product="transthyretin precursor"
                     /note="prealbumin, amyloidosis type I; thyroxine-binding
                     prealbumin; epididymis luminal protein 111"
                     /calculated_mol_wt=13761
     sig_peptide     1..20
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=2144
     mat_peptide     21..147
                     /product="transthyretin"
                     /calculated_mol_wt=13761
     Region          27..147
                     /region_name="TR_THY"
                     /note="Transthyretin; smart00095"
                     /db_xref="CDD:128406"
     Site            72
                     /site_type="other"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine. {ECO:0000250|UniProtKB:P02767};
                     propagated from UniProtKB/Swiss-Prot (P02766.1)"
     Region          135..139
                     /region_name="Thyroid hormone binding"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (P02766.1)"
     CDS             1..147
                     /gene="TTR"
                     /gene_synonym="ATTR; CTS; CTS1; HEL111; HsT2651; PALB;
                     TBPA"
                     /coded_by="NM_000371.3:137..580"
                     /db_xref="CCDS:CCDS11899.1"
                     /db_xref="GeneID:7276"
                     /db_xref="HGNC:HGNC:12405"
                     /db_xref="MIM:176300"
ORIGIN      
        1 mashrllllc laglvfvsea gptgtgeskc plmvkvldav rgspainvaV hvfrkaaddt
       61 wepfasgkts esgelhgltt eeefvegiyk veidtksywk algispfheh aevvftands
      121 gprrytiaal lspysystta vvtnpke
//
Preproproetein 147- signal protein 20 = TTR  127 a.a.
Different  mutations: Early dg important.
v30m,  amyloidogenic mutation of TTR,
V30M mutations (Swedish)
nonV30M mutations
F33L (Hungarian)
H88R (Hungarian)
A65G (Dutch)
G121S,(Japanese)  more stabile TTR  , non amyloidogenic mutation


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